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  "_id": "6a1bfed11d7bb097a0a28b3d",
  "Package": "switchBox",
  "Version": "1.19.0",
  "Date": "2016-10-03",
  "Title": "Utilities to train and validate classifiers based on pair\nswitching using the K-Top-Scoring-Pair (KTSP) algorithm",
  "Author": "Bahman Afsari <bahman@jhu.edu>, Luigi Marchionni\n<marchion@jhu.edu>, Wikum Dinalankara <wdinala1@jhmi.edu>",
  "Maintainer": "Bahman Afsari <bahman@jhu.edu>, Luigi Marchionni\n<marchion@jhu.edu>, Wikum Dinalankara <wdinala1@jhmi.edu>",
  "Description": "The package offer different classifiers based on\ncomparisons of pair of features (TSP), using various decision\nrules (e.g., majority wins principle).",
  "biocViews": "Software, StatisticalMethod, Classification",
  "License": "GPL-2",
  "Packaged": {
    "Date": "2026-05-31 09:21:51 UTC",
    "User": "root"
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  "NeedsCompilation": "yes",
  "Repository": "https://marchionnilab.r-universe.dev",
  "Date/Publication": "2018-11-16 13:46:25 UTC",
  "RemoteUrl": "https://github.com/marchionniLab/switchBox",
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  "_published": "2026-05-31T09:26:41.592Z",
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    {
      "page": "switchBox-package",
      "title": "A package to train and apply K-Top-Scoring-Pair (KTSP) classifiers.",
      "topics": [
        "switchBox-package",
        "switchBox"
      ]
    },
    {
      "page": "KTSP.Classify",
      "title": "Function to classify samples using a KTSP classifier.",
      "topics": [
        "KTSP.Classify"
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    },
    {
      "page": "KTSP.Train",
      "title": "Funtion for training the K-TSP classifier.",
      "topics": [
        "KTSP.Train"
      ]
    },
    {
      "page": "matTesting",
      "title": "Gene expression matrix for test set data",
      "topics": [
        "matTesting"
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    {
      "page": "matTraining",
      "title": "Gene expression matrix for training set data",
      "topics": [
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      "page": "SWAP.Calculate.SignedTSPScores",
      "title": "Function to calculate signed TSP scores.",
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      "page": "SWAP.CalculateSignedScore",
      "title": "Function to calculate the pair-wise scores.",
      "topics": [
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      "page": "SWAP.Filter.Wilcoxon",
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      "page": "SWAP.GetKTSP.PredictionStats",
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      "topics": [
        "SWAP.GetKTSP.PredictionStats"
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      "title": "Function for prediction followed by computing various performance measures related to prediction.",
      "topics": [
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      "topics": [
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      "page": "SWAP.Kby.Ttest",
      "title": "K selection for a kTSP classifier.",
      "topics": [
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      "page": "SWAP.KTSP.Classify",
      "title": "Function to classify samples using a KTSP classifier.",
      "topics": [
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