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switchBox - Utilities to train and validate classifiers based on pair switching using the K-Top-Scoring-Pair (KTSP) algorithm

The package offer different classifiers based on comparisons of pair of features (TSP), using various decision rules (e.g., majority wins principle).

Last updated

softwarestatisticalmethodclassification

5.32 score 2 stars 1 dependents 87 scripts

divergence - Divergence: Functionality for assessing omics data by divergence with respect to a baseline

This package provides functionality for performing divergence analysis as presented in Dinalankara et al, "Digitizing omics profiles by divergence from a baseline", PANS 2018. This allows the user to simplify high dimensional omics data into a binary or ternary format which encapsulates how the data is divergent from a specified baseline group with the same univariate or multivariate features.

Last updated

softwarestatisticalmethod

3.74 score 1 stars 11 scripts

RTopper - This package is designed to perform Gene Set Analysis across multiple genomic platforms

the RTopper package is designed to perform and integrate gene set enrichment results across multiple genomic platforms.

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microarray

3.70 score 7 scripts

covid19census - Extracts Covid-19 and other demographic metrics regarding U.S.A and Italy

Package with functions to scrape data regarding COVID-19 epidemic in U.S.A and Italy, as well as datasets with related indexes.

Last updated

2.00 score 2 stars 4 scripts

lpcover - LPCover: Functionality for integer programming methods for covering

Integer programming functionality for different 'covering' optimizations as presented in Ke et al, "Efficient Representations of Tumor Diversity with Paired DNA-RNA Anomalies".

Last updated

softwarestatisticalmethod

1.70 score 2 scripts